CDS

Accession Number TCMCG007C25284
gbkey CDS
Protein Id XP_033146694.1
Location complement(join(868464..868739,868815..869393,869512..869869,869947..870284,870375..870421,870503..870557,870637..870762,870843..870902,871024..871049,871148..871309,871376..871382))
Gene LOC103862842
GeneID 103862842
Organism Brassica rapa

Protein

Length 677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033290803.1
Definition polygalacturonate 4-alpha-galacturonosyltransferase isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category G
Description Belongs to the glycosyltransferase 8 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R05191        [VIEW IN KEGG]
KEGG_rclass RC00005        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01003        [VIEW IN KEGG]
KEGG_ko ko:K13648        [VIEW IN KEGG]
EC 2.4.1.43        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00520        [VIEW IN KEGG]
map00520        [VIEW IN KEGG]
GOs GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008194        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009832        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010289        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010393        [VIEW IN EMBL-EBI]
GO:0010394        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016758        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044038        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0045488        [VIEW IN EMBL-EBI]
GO:0045489        [VIEW IN EMBL-EBI]
GO:0047262        [VIEW IN EMBL-EBI]
GO:0052325        [VIEW IN EMBL-EBI]
GO:0052546        [VIEW IN EMBL-EBI]
GO:0070589        [VIEW IN EMBL-EBI]
GO:0070592        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTCGAATGGCGCTGAAGCGAGGGTTATCCGGAGTTAACCGGATCAGAGGCGGAGGTGGTGGATCTCGATCTGCCATTGTCGTCTCCGTCTTTCTCTGTGTGTTCGCGCCTCTCGTCTTCTTCTTCTTCGTTGGACGTGGAGTATTATATATCGATTCCTCTAACGATTATGCAAATGCTTCTGTGAAGCAGAGTCTTGACTGGAGAGAACGCTTAGCTATGCAATCTCTTAGATCTCTCTTCTCTAAAGAGGTACTAGATGTTATCACTGCTAGCACAGCTGATTTGGGTCCTTATAGCCTCGATTCTTTCAAGAAAAACAGTTTGTCACCATCATGGCGTGAAGTGGAAGTAGACACCTCCTTTAGAAACCCTCAGGAGAATCAAACAGCATCTAGTATCTTGAATGCAAAACGTGACACTACTTCAAAAGGTGGTAGCCATCAGAAAGTTGAGACACCTGAAAAGTTATACAGAAGGCAACTGAGAGAGAAAAGACGTGAGAGGCGAGCAAATGAGTTAGTACAACAGCACAACGACGACACCATTTTGAAACTCGAAAACGCGGCCATCGAGCGCTCCAAGTCTGTTGATTCTGCAGTCCTTGGAAAATATAGTATCTGGAGAAGAGAAAACGAGAACGACAACTCTGATTCCAATATACGCTTGATGAGGGATCAAGCGATCATGGCTAGAGTCTACAGTGGTCTCGCAAAACTGAAGAACAAAACTGAGCTGTTACAAGAACTCCAGGCCCGGATTAAAGACAGACAACGTGTTTTGGGTGAATCAACAACTGATTCAGATCTTCCTCGGAGTGCACATGATAAACTGAGAGACATGGGTCAAGTCTTGGCTAAGGCGAAGATGCAGTTATATGACTGCAAGCTGGTTACTGGAAAGCTGAGAGCAATGCTTCAAACCGCAGATGAGCAAGTCAGGAGCTTAAAGAAGCAGAGTACTTTTCTGGCTCAGTTAGCAGCGAAAACTATTCCAAATGCTATCCATTGTCTGTCGATGCGCTTGACCATTGATTACTATCTTCTTTCTCCGGAGAAAAGAAAATTCCCTCGCAGTGAAAACCTAGAGAACCCTAATCTTTACCATTATGCCCTGTTCTCTGACAACGTGTTGGCTGCATCAGTGGTTGTGAACTCAGCCATCAGGAATGCCAAGGATCCTTCGAAGCATGTGTTTCACCTTGTGACGGATAAACTCAACTTCGGAGCAATGAACATGTGGTTCCTCCTAAACCCACCTGGAAAGGCAACCATACATGTGGAAAACGTGGATGAGTTTAAGTGGCTCAACTCATCTTACTGCCCTGTTCTTCGTCAGCTTGAATCTGCAGCAATGAAGGAATTCTATTTCAAAGCAGATCATCCAACTTCAGGCTCCTCTAATCTCAAATACAGAAACCCAAAGTACCTGTCCATGTTGAATCACTTGAGATTCTACCTCCCTGAGGTTTATCCCAAGCTGAACAAGATCCTGTTCCTGGACGACGACATCATCGTTCAGAAAGACCTGACTCCGCTCTGGGAAGTCAACCTGAACGGTAAAGTCAACGGTGCGGTTGAAACCTGTGGAGAGAGTTTCCACAGATTCGACAAGTATCTCAACTTCTCGAATCCTCATATAGCGAGGAACTTCAATCCAAACGCTTGTGGATGGGCTTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAGACATCACTGGTATCTACCACAAGTGGCAAAACATGAATGAGAACAGGACACTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACTAACACATCCTTTGAACAAGGCGTGGCATGTGCTGGGACTTGGATATAACCCGAGTATAGCAAAGAAAGACATTGAGAATGCAGCAGTGGTTCATTACAATGGGAACATGAAACCGTGGTTGGAGTTAGCTATGTCCAAGTATCGACCGTATTGGACAAAGTATATCCAGTTTGATCACCCATATCTTCGTAGATGCAACCTTCATGAATAA
Protein:  
MIRMALKRGLSGVNRIRGGGGGSRSAIVVSVFLCVFAPLVFFFFVGRGVLYIDSSNDYANASVKQSLDWRERLAMQSLRSLFSKEVLDVITASTADLGPYSLDSFKKNSLSPSWREVEVDTSFRNPQENQTASSILNAKRDTTSKGGSHQKVETPEKLYRRQLREKRRERRANELVQQHNDDTILKLENAAIERSKSVDSAVLGKYSIWRRENENDNSDSNIRLMRDQAIMARVYSGLAKLKNKTELLQELQARIKDRQRVLGESTTDSDLPRSAHDKLRDMGQVLAKAKMQLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLAQLAAKTIPNAIHCLSMRLTIDYYLLSPEKRKFPRSENLENPNLYHYALFSDNVLAASVVVNSAIRNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEFYFKADHPTSGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLNKILFLDDDIIVQKDLTPLWEVNLNGKVNGAVETCGESFHRFDKYLNFSNPHIARNFNPNACGWAYGMNMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLPPGLITFYGLTHPLNKAWHVLGLGYNPSIAKKDIENAAVVHYNGNMKPWLELAMSKYRPYWTKYIQFDHPYLRRCNLHE